Publications

Curated research outputs from the MLKD group.

all types Journal Conference Book / Chapter Preprint

2025

CountPath: Automating Fragment Counting in Digital Pathology

Ana Beatriz Vieira, Maria João Valente, Tomé Albuquerque, Diana Montezuma, Liliana Ribeiro, Domingos Oliveira, João Monteiro, Sofia Gonçalves, Isabel Pinto, Jaime S. Cardoso, Arlindo L. Oliveira

conference summary

Leveraging LLMs to Streamline the Review of Public Funding Applications

João Marques, Andre Vicente Duarte, André Mendes Marques de Carvalho, Gil Rocha, Bruno da Costa Martins, Arlindo L. Oliveira

conference summary

2024

LumberChunker: Long-Form Narrative Document Segmentation

André V. Duarte, João Marques, Miguel Graça, Miguel Freire, Lei Li, Arlindo L. Oliveira

conference

2023

Augmentation-Based Approaches for Overcoming Low Visibility in Street Object Detection

João Pedro Novo, Manuel Goulão, L. Bandeira, Bruno Martins, Arlindo L. Oliveira

conference

Improving Embeddings for High-Accuracy Transformer-Based Address Matching Using a Multiple in-Batch Negatives Loss

André V. Duarte, Arlindo L. Oliveira

conference

2022

Stenosis Detection in X-ray Coronary Angiography with Deep Neural Networks Leveraged by Attention Mechanisms

Pedro Van Stralen, Dinis L. Rodrigues, Arlindo L. Oliveira, Miguel Nobre Menezes, Fausto J. Pinto

conference

Assessing the Impact of Attention and Self-Attention Mechanisms on the Classification of Skin Lesions

Rafael Pedro, Arlindo L. Oliveira

2022 International Joint Conference on Neural Networks (IJCNN) conference

2016

LEMPEL-ZIV SLIDING WINDOW UPDATE WITH SUFFIX ARRAYS

Artur Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo

Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT) conference

ELIXIR in a Business Model Canvas

José Borbinha, João Cardoso, Inês Chaves, Bruno Cesar Pereira da Costa, Cymon Cox, Daniel Faria, Pedro Fernandes, Celia María Gonzalo Miguel, Ahmad Nadali, Daniel Sobral, Arlindo L. Oliveira, Mário J. Silva

Open MIND conference

2014

An Adaptive Step-Size Least Mean Square Algorithm for Electric Power Systems Frequency Estimation in protective relays

Gustavo Marchesan, Arlindo L. Oliveira, Ghendy Cardoso, Adriano Peres de Morais, L. Mariotto

conference

2011

Quantitative Modeling the Saccharomyces cerevisiae FLR1 Regulatory Network Using an S-System Formalism

Dulce Calçada, Susana Vinga, Ana T. Freitas, Arlindo L. Oliveira

conference

Using systems biology approaches to study a multidrug resistance network

Paulo Jorge Dias, Catarina Costa, Isabel Sá‐Correia, Miguel C. Teixeira, Pedro T. Monteiro, Arlindo L. Oliveira, Ana T. Freitas

conference

Sliding Window Update Using Suffix Arrays

Artur Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo

conference

2010

Paulo Trezentos, Inês Lynce, Arlindo L. Oliveira

conference

2009

On the Use of Suffix Arrays for Memory-Efficient Lempel-Ziv Data Compression

Artur Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo

conference

2008

Generic ILP vs Specialized 0-1 ILP for Haplotype Inference

Ana Graça, Inês Lynce, João Marques‐Silva, Arlindo L. Oliveira

ePrints Soton (University of Southampton) conference

SUFFIX ARRAYS - A Competitive Choice for Fast Lempel-Ziv Compressions

Artur Ferreira, Arlindo L. Oliveira, Mário A. T. Figueiredo

conference

Haplotype Inference with Boolean Constraint Solving: An Overview

Inês Lynce, Ana Graça, João Marques‐Silva, Arlindo L. Oliveira

conference

Models and Algorithms for Computing Minimum-Size Prime Implicants

Vasco Manquinho, Arlindo L. Oliveira, João Marques‐Silva

conference

2007

Session details: Graph based retrieval (IR)

Arlindo L. Oliveira

conference

Efficient and Tight Upper Bounds for Haplotype Inference by Pure Parsimony

João Marques‐Silva, Inês Lynce, Ana Graça, Arlindo L. Oliveira

ePrints Soton (University of Southampton) conference

Efficient and tight upper bounds for haplotype inference by pure parsimony using delayed haplotype selection

João Marques‐Silva, Inês Lynce, Ana Graça, Arlindo L. Oliveira

conference

Learning bayesian networks consistent with the optimal branching

Alexandra M. Carvalho, Arlindo L. Oliveira

conference

AN EFFICIENT BICLUSTERING ALGORITHM FOR FINDING GENES WITH SIMILAR PATTERNS IN TIME-SERIES EXPRESSION DATA

Sara C. Madeira, Arlindo L. Oliveira

conference

Semi-supervised single-label text categorization using centroid-based classifiers

Ana Cardoso-Cachopo, Arlindo L. Oliveira

conference

2006

An efficient algorithm for the identification of structured motifs in DNA promoter sequences

Carvalho, A.M., Freitas, A.T., Arlindo L. Oliveira, Sagot, M.-F.

HAL (Le Centre pour la Communication Scientifique Directe) conference

Additional materials and results for MUSA

Nuno D. Mendes, Ana Casimiro, Pedro M. Santos, Arlindo L. Oliveira, Ana T. Freitas

conference

Probabilistic Testability Analysis and DFT Methods at RTL

J. Fernandes, Marcelino Santos, Arlindo L. Oliveira, João Teixeira

conference

Empirical Evaluation of Centroid-based Models for Single-label Text Categorization

Ana Cardoso-Cachopo, Arlindo L. Oliveira, Rua Alves Redol

conference

2004

UN MODELO DE RECUPERACIÓN DE INFORMACIÓN BASADO EN SVMs INFORMATION RETRIEVAL MODEL BASED ON SVMS

Mora Maldonado, Arlindo L. Oliveira, Jorge Sánchez

conference

Un modelo de recuperación de información basado en SVMs

Fernanda Maldonado Naude, Arlindo L. Oliveira, J. Alfredo Sánchez

conference

Towards Automatic Learning of a Structure Ontology For Technical Articles

André L. Martins, H. Sofia Pinto, Arlindo L. Oliveira

conference

Mining Patterns Using Relaxations of User Defined Constraints

Cláudia Antunes, Arlindo L. Oliveira, Técnico Inesc-id

conference

A probabilistic method for the computation of testability of RTL constructs

José M. Fernandes, Marcelino Santos, Arlindo L. Oliveira, João Teixeira

Design, Automation, and Test in Europe conference

A probabilistic method for the computation of testability of RTL constructs

J. Fernandes, Marcelino Santos, Arlindo L. Oliveira, João Teixeira

Proceedings Design, Automation and Test in Europe Conference and Exhibition conference

SEQUENTIAL PATTERN MINING WITH APPROXIMATED CONSTRAINTS

Cláudia Antunes, Arlindo L. Oliveira

conference

Sequential Pattern Mining Algorithms: Trade-offs between Speed and Memory

Cláudia Antunes, Arlindo L. Oliveira

conference

2003

Bottom-up methodology for test preparation and refinement

J.A. Gracio, P.A. Bicudo, N.N. Rua, Arlindo L. Oliveira, C.F.B. Almeida, J.P. Teixeira

conference

Bottom-up testing methodology for VLSI

J.P. Teixeira, C.F.B. Almeida, J.A. Gracio, P.A. Bicudo, Arlindo L. Oliveira, N.N. Rua

conference

Test preparation and fault analysis using a bottom-up methodology

J.A. Gracio, P.A. Bicudo, N.N. Rua, Arlindo L. Oliveira, C.F.B. Almeida, J.P. Teixeira

conference

Implicit resolution of the Chapman-Kolmogorov equations for sequential circuits: an application in power estimation

Ana T. Freitas, Arlindo L. Oliveira

2003 Design, Automation and Test in Europe Conference and Exhibition conference

Implicit Resolution of the Chapman-Kolmogorov Equations for Sequential Circuits: An Application in Power Estimation

Ana T. Freitas, Arlindo L. Oliveira

conference

Analog Macromodeling using Kernel Methods

Joel Phillips, João L. Afonso, Arlindo L. Oliveira, L. Miguel Silveira

conference

Analog macromodeling using kernel methods

Joel Phillips, Júlia Larré Afonso, Arlindo L. Oliveira, L. Miguel Silveira

ICCAD-2003. International Conference on Computer Aided Design (IEEE Cat. No.03CH37486) conference

2002

FSM decomposition by direct circuit manipulation applied to low power design

José Monteiro, Arlindo L. Oliveira

conference

An exact gate assignment algorithm for tree circuits under rise and fall delays

Arlindo L. Oliveira, R. Murgai

conference

Power optimization of combinational modules using self-timed precomputation

APL Mota, José Monteiro, Arlindo L. Oliveira

conference

Circuit partitioning techniques for power estimation using the full set of input correlations

Ana T. Freitas, Arlindo L. Oliveira

conference

LSAT-an algorithm for the synthesis of two level threshold gate networks

Arlindo L. Oliveira, Alberto Sangiovanni‐Vincentelli

conference

Proceedings of the 9th International Symposium on String Processing and Information Retrieval

Alberto H. F. Laender, Arlindo L. Oliveira

conference