SMSara MadeiraCurrent PhD Students CompletedLinkedInPublications2013The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation inSaccharomyces cerevisiaeMiguel C. Teixeira, Pedro T. Monteiro, Joana F. Guerreiro, Joana P. Gonçalves, Nuno P. Mira, Sandra C. dos Santos, Tânia R. Cabrito, Margarida Palma, Catarina Costa, Alexandre P. Francisco, Sara C. Madeira, Arlindo L. Oliveira, Ana Teresa Freitas, Isabel Sá‐CorreiaNucleic Acids Research journal summary2011TFRank: network-based prioritization of regulatory associations underlying transcriptional responsesJoana P. Gonçalves, Alexandre P. Francisco, Nuno P. Mira, Miguel C. Teixeira, Isabel Sá‐Correia, Arlindo L. Oliveira, Sara C. MadeiraBioinformatics journal summary2010YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interfaceD. Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra C. dos Santos, Tânia R. Cabrito, Alexandre P. Francisco, Sara C. Madeira, R. S. Aires, Arlindo L. Oliveira, Isabel Sá‐Correia, Ana T. FreitasNucleic Acids Research journal summary2009Efficient Biclustering Algorithms for Time Series Gene Expression Data AnalysisSara C. Madeira, Arlindo L. OliveiraLecture notes in computer science book A polynomial time biclustering algorithm for finding approximate expression patterns in gene expression time seriesSara C. Madeira, Arlindo L. OliveiraAlgorithms for Molecular Biology journal summaryBiGGEsTS: integrated environment for biclustering analysis of time series gene expression dataJoana P. Gonçalves, Sara C. Madeira, Arlindo L. OliveiraBMC Research Notes journal summaryIdentification of Regulatory Modules in Time Series Gene Expression Data Using a Linear Time Biclustering AlgorithmSara C. Madeira, Miguel C. Teixeira, Isabel Sá‐Correia, Arlindo L. OliveiraIEEE/ACM Transactions on Computational Biology and Bioinformatics journal summary2007AN EFFICIENT BICLUSTERING ALGORITHM FOR FINDING GENES WITH SIMILAR PATTERNS IN TIME-SERIES EXPRESSION DATASara C. Madeira, Arlindo L. Oliveira conference summary2005A Linear Time Biclustering Algorithm for Time Series Gene Expression DataSara C. Madeira, Arlindo L. OliveiraLecture notes in computer science book 2004Biclustering algorithms for biological data analysis: a surveySara C. Madeira, Arlindo L. OliveiraIEEE/ACM Transactions on Computational Biology and Bioinformatics journal summary2003A Data Mining Approach to Credit Risk Evaluation and Behaviour ScoringSara C. Madeira, Arlindo L. Oliveira, Catarina S. ConceiçãoLecture notes in computer science book ← All people
The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation inSaccharomyces cerevisiaeMiguel C. Teixeira, Pedro T. Monteiro, Joana F. Guerreiro, Joana P. Gonçalves, Nuno P. Mira, Sandra C. dos Santos, Tânia R. Cabrito, Margarida Palma, Catarina Costa, Alexandre P. Francisco, Sara C. Madeira, Arlindo L. Oliveira, Ana Teresa Freitas, Isabel Sá‐CorreiaNucleic Acids Research journal summary
TFRank: network-based prioritization of regulatory associations underlying transcriptional responsesJoana P. Gonçalves, Alexandre P. Francisco, Nuno P. Mira, Miguel C. Teixeira, Isabel Sá‐Correia, Arlindo L. Oliveira, Sara C. MadeiraBioinformatics journal summary
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interfaceD. Abdulrehman, Pedro T. Monteiro, Miguel C. Teixeira, Nuno P. Mira, Artur B. Lourenço, Sandra C. dos Santos, Tânia R. Cabrito, Alexandre P. Francisco, Sara C. Madeira, R. S. Aires, Arlindo L. Oliveira, Isabel Sá‐Correia, Ana T. FreitasNucleic Acids Research journal summary
Efficient Biclustering Algorithms for Time Series Gene Expression Data AnalysisSara C. Madeira, Arlindo L. OliveiraLecture notes in computer science book
A polynomial time biclustering algorithm for finding approximate expression patterns in gene expression time seriesSara C. Madeira, Arlindo L. OliveiraAlgorithms for Molecular Biology journal summary
BiGGEsTS: integrated environment for biclustering analysis of time series gene expression dataJoana P. Gonçalves, Sara C. Madeira, Arlindo L. OliveiraBMC Research Notes journal summary
Identification of Regulatory Modules in Time Series Gene Expression Data Using a Linear Time Biclustering AlgorithmSara C. Madeira, Miguel C. Teixeira, Isabel Sá‐Correia, Arlindo L. OliveiraIEEE/ACM Transactions on Computational Biology and Bioinformatics journal summary
AN EFFICIENT BICLUSTERING ALGORITHM FOR FINDING GENES WITH SIMILAR PATTERNS IN TIME-SERIES EXPRESSION DATASara C. Madeira, Arlindo L. Oliveira conference summary
A Linear Time Biclustering Algorithm for Time Series Gene Expression DataSara C. Madeira, Arlindo L. OliveiraLecture notes in computer science book
Biclustering algorithms for biological data analysis: a surveySara C. Madeira, Arlindo L. OliveiraIEEE/ACM Transactions on Computational Biology and Bioinformatics journal summary
A Data Mining Approach to Credit Risk Evaluation and Behaviour ScoringSara C. Madeira, Arlindo L. Oliveira, Catarina S. ConceiçãoLecture notes in computer science book